Transcript: ENST00000358065.4 SETMAR-001

Description

SET domain and mariner transposase fusion gene [Source:HGNC Symbol;Acc:10762]

Gene Synonyms

HsMar1, METNASE, Mar1, metnase

Location

Chromosome 3: 4,344,988-4,359,251 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 7003 variant alleles and maps to 329 oligo probes.

Gene

This transcript is a product of gene ENSG00000170364.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358065.4	SETMAR-001	2443	684aa	ENSP00000373354.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2563	Q53H47	NM_006515.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430981.1	SETMAR-002	1671	365aa	ENSP00000403000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63528	C9JHK2	NM_001276325.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425863.1	SETMAR-008	1657	545aa	ENSP00000403145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58814	E7EN68	NM_001243723.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358950.4	SETMAR-003	701	212aa	ENSP00000369673.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B9ZVV8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413809.1	SETMAR-007	1676	171aa	ENSP00000393044.1	Nonsense mediated decay		F8WEU1	-	-
ENST00000425046.1	SETMAR-006	1359	67aa	ENSP00000397463.1	Nonsense mediated decay		F8WB33	-	-
ENST00000462115.1	SETMAR-005	668	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490691.1	SETMAR-010	457	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,443 bps, Translation length: 684 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q53H47

CCDS

This transcript is a member of the Human CCDS set: CCDS2563

Version

ENST00000358065.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206587 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000358065.4 SETMAR-001

Summary