Transcript: ENST00000355609.4 IFFO2-003

Description

intermediate filament family orphan 2 [Source:HGNC Symbol;Acc:27006]

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 1668 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000455833.2	IFFO2-001	6188	517aa	ENSP00000387941.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44076	Q5TF58	NM_001136265.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416166.1	IFFO2-002	1000	259aa	ENSP00000394655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000355609.4	IFFO2-003	537	88aa	ENSP00000347820.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KNZ4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 537 bps, Translation length: 88 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000355609.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393306 (version 1)