Transcript: ENST00000580382.1 FASN-005

Description

fatty acid synthase [Source:HGNC Symbol;Acc:3594]

Gene Synonyms

FAS, OA-519, SDR27X1

Location

Chromosome 17: 80,037,044-80,038,618 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 1037 variant alleles and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSG00000169710.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306749.2	FASN-001	8560	2511aa	ENSP00000304592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11801	P49327	NM_004104.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580382.1	FASN-005	681	78aa	ENSP00000462949.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000579758.1	FASN-007	853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584610.1	FASN-006	1252	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578424.1	FASN-004	836	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000579410.1	FASN-003	424	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 681 bps, Translation length: 78 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000580382.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000442372 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000580382.1 FASN-005

Summary