Transcript: ENST00000494426.1 CLIC3-001

Description

chloride intracellular channel 3 [Source:HGNC Symbol;Acc:2064]

Location

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 1477 variant alleles and maps to 406 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000494426.1	CLIC3-001	1017	236aa	ENSP00000419378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7021	O95833 Q5SQ17 Q6FGP1	NM_004669.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480181.1	CLIC3-005	794	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473911.1	CLIC3-004	732	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,017 bps, Translation length: 236 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95833

CCDS

This transcript is a member of the Human CCDS set: CCDS7021

Version

ENST00000494426.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055173 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.