Transcript: ENST00000307407.3 IL8-001

Description

interleukin 8 [Source:HGNC Symbol;Acc:6025]

Gene Synonyms

3-10C, AMCF-I, CXCL8, GCP-1, GCP1, IL-8, K60, LECT, LUCT, LYNAP, MDNCF, MONAP, NAF, NAP-1, NAP1, SCYB8, TSG-1, b-ENAP

Location

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features, is associated with 1581 variant alleles and maps to 488 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307407.3	IL8-001	1705	99aa	ENSP00000306512.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34005	C9J4T6 P10145	NM_000584.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401931.1	IL8-002	700	95aa	ENSP00000385908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4T6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483500.1	IL8-003	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,705 bps, Translation length: 99 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P10145

CCDS

This transcript is a member of the Human CCDS set: CCDS34005

Version

ENST00000307407.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000322211 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.