Transcript: ENST00000419268.1 AFAP1L2-006

Description

actin filament associated protein 1-like 2 [Source:HGNC Symbol;Acc:25901]

Gene Synonyms

Em:AC005383.4, FLJ14564, KIAA1914, XB130

Location

Chromosome 10: 116,070,113-116,164,239 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 40133 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSG00000169129.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000304129.4	AFAP1L2-002	3705	818aa	ENSP00000303042.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31286	Q8N4X5	NM_001287824.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369271.3	AFAP1L2-001	3964	814aa	ENSP00000358276.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31287	B7Z363 Q8N4X5	NM_032550.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545353.1	AFAP1L2-201	2932	871aa	ENSP00000444511.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2Q0 F5GZE1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419268.1	AFAP1L2-006	961	312aa	ENSP00000396781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6QUH3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491814.1	AFAP1L2-003	3704	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486300.1	AFAP1L2-004	848	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483496.1	AFAP1L2-007	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 961 bps, Translation length: 312 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000419268.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050466 (version 3)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000419268.1 AFAP1L2-006

Summary