Transcript: ENST00000561627.1 PLA2G4F-007

Description

phospholipase A2, group IVF [Source:HGNC Symbol;Acc:27396]

Gene Synonyms

PLA2G4F/Z, PLA2G4FZ

Location

Chromosome 15: 42,442,863-42,448,807 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 2973 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSG00000168907.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382396.4	PLA2G4F-001	3420	849aa	ENSP00000371833.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32204	Q68DD2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397272.3	PLA2G4F-201	3498	851aa	ENSP00000380442.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J281	NM_213600.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569985.1	PLA2G4F-002	3329	296aa	ENSP00000454330.1	Nonsense mediated decay		H3BMD0	-	-
ENST00000290497.7	PLA2G4F-003	3319	60aa	ENSP00000290497.7	Nonsense mediated decay		H7BXJ8	-	-
ENST00000562320.1	PLA2G4F-005	1402	86aa	ENSP00000455037.1	Nonsense mediated decay		H3BNW4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561627.1	PLA2G4F-007	584	119aa	ENSP00000456697.1	Nonsense mediated decay		H3BSG9	-	-
ENST00000565553.1	PLA2G4F-006	574	70aa	ENSP00000455513.1	Nonsense mediated decay		H3BPX7	-	-
ENST00000561893.1	PLA2G4F-008	780	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 584 bps, Translation length: 119 residues

Version

ENST00000561627.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420468 (version 1)

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Transcript: ENST00000561627.1 PLA2G4F-007

Summary