Transcript: ENST00000472422.2 SLC16A4-002

Description

solute carrier family 16, member 4 [Source:HGNC Symbol;Acc:10925]

Gene Synonyms

MCT4, MCT5

Location

Chromosome 1: 110,905,482-110,933,648 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 12034 variant alleles and maps to 440 oligo probes.

Gene

This transcript is a product of gene ENSG00000168679.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369779.4	SLC16A4-001	2632	487aa	ENSP00000358794.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS823	O15374	NM_004696.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472422.2	SLC16A4-002	2420	439aa	ENSP00000432495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55623	O15374	NM_001201546.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369781.4	SLC16A4-004	2082	319aa	ENSP00000358796.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55624	O15374	NM_001201549.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541986.1	SLC16A4-202	1551	425aa	ENSP00000446087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55622	O15374	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437429.2	SLC16A4-201	1541	382aa	ENSP00000394790.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55621	O15374	NM_001201548.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467986.2	SLC16A4-007	1059	219aa	ENSP00000435768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YEG4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000461647.2	SLC16A4-003	1962	57aa	ENSP00000432190.1	Nonsense mediated decay		E9PKZ1	-	-
ENST00000528649.1	SLC16A4-006	1562	42aa	ENSP00000434136.1	Nonsense mediated decay		E9PRV1	-	-
ENST00000492412.2	SLC16A4-008	1551	57aa	ENSP00000433463.1	Nonsense mediated decay		E9PKZ1	-	-
ENST00000497687.1	SLC16A4-005	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,420 bps, Translation length: 439 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15374

CCDS

This transcript is a member of the Human CCDS set: CCDS55623

Version

ENST00000472422.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000031955 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000472422.2 SLC16A4-002

Summary