Transcript: ENST00000518077.1 GFRA2-003

Description

GDNF family receptor alpha 2 [Source:HGNC Symbol;Acc:4244]

Gene Synonyms

GDNFRB, NRTNR-ALPHA, NTNRA, RETL2, TRNR2

Location

Chromosome 8: 21,550,447-21,645,835 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 48673 variant alleles and maps to 339 oligo probes.

Gene

This transcript is a product of gene ENSG00000168546.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000524240.1	GFRA2-001	4921	464aa	ENSP00000428518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47816	E5RGR6 E5RJ44 O00451	NM_001495.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400782.4	GFRA2-201	3013	359aa	ENSP00000383592.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55208	O00451	NM_001165039.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517328.1	GFRA2-005	2104	464aa	ENSP00000429445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47816	E5RGR6 E5RJ44 O00451	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518077.1	GFRA2-003	1503	331aa	ENSP00000429206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55207	O00451	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517892.1	GFRA2-004	1392	359aa	ENSP00000429979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00451	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522071.1	GFRA2-006	874	265aa	ENSP00000428721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGR6 E5RJ44	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519195.1	GFRA2-007	546	74aa	ENSP00000430622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ44	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000306793.4	GFRA2-002	3558	62aa	ENSP00000306654.4	Nonsense mediated decay		J3KNF0	-	-
ENST00000520676.1	GFRA2-008	616	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,503 bps, Translation length: 331 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00451

CCDS

This transcript is a member of the Human CCDS set: CCDS55207

Version

ENST00000518077.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000376255 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000518077.1 GFRA2-003

Summary