Transcript: ENST00000301908.3 PNOC-001

Description

prepronociceptin [Source:HGNC Symbol;Acc:9163]

Gene Synonyms

OFQ, PPNOC

Location

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 11929 variant alleles and maps to 321 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301908.3	PNOC-001	1200	176aa	ENSP00000301908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6066	B7Z749 E7EVP0 Q13519 Q9BYY3	NM_006228.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522209.1	PNOC-002	1007	112aa	ENSP00000430145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64862	B7Z749	NM_001284244.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518479.1	PNOC-004	554	154aa	ENSP00000428059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVP0 Q9BYY3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519592.1	PNOC-003	1310	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 1,200 bps, Translation length: 176 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13519

CCDS

This transcript is a member of the Human CCDS set: CCDS6066

Version

ENST00000301908.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000219964 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.