Transcript: ENST00000294066.2 MAP4K2-001

Description

mitogen-activated protein kinase kinase kinase kinase 2 [Source:HGNC Symbol;Acc:6864]

Gene Synonyms

BL44, GCK, RAB8IP

Location

Chromosome 11: 64,556,609-64,570,713 reverse strand.

About this transcript

This transcript has 32 exons, is annotated with 16 domains and features, is associated with 7582 variant alleles and maps to 794 oligo probes.

Gene

This transcript is a product of gene ENSG00000168067.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294066.2	MAP4K2-001	2955	820aa	ENSP00000294066.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8082	Q12851	NM_004579.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377350.3	MAP4K2-002	2931	812aa	ENSP00000366567.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86VU3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439069.1	MAP4K2-006	947	307aa	ENSP00000403563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000435926.1	MAP4K2-012	3169	57aa	ENSP00000400594.1	Nonsense mediated decay		F2Z2B3	-	-
ENST00000433890.1	MAP4K2-014	2410	57aa	ENSP00000413167.1	Nonsense mediated decay		F2Z2B3	-	-
ENST00000424945.1	MAP4K2-005	1175	144aa	ENSP00000403410.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000444560.1	MAP4K2-013	469	58aa	ENSP00000404534.1	Nonsense mediated decay		F8WCP4	-	-
ENST00000468062.1	MAP4K2-010	818	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482314.1	MAP4K2-007	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493428.1	MAP4K2-011	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470088.1	MAP4K2-004	1805	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489952.1	MAP4K2-008	1468	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467689.1	MAP4K2-009	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 32, Coding exons: 32, Transcript length: 2,955 bps, Translation length: 820 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12851

CCDS

This transcript is a member of the Human CCDS set: CCDS8082

Version

ENST00000294066.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000105239 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000294066.2 MAP4K2-001

Summary