Transcript: ENST00000530888.1 RAB3IL1-004

Description

RAB3A interacting protein (rabin3)-like 1 [Source:HGNC Symbol;Acc:9780]

Gene Synonyms

GRAB

Location

Chromosome 11: 61,669,982-61,672,174 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 949 variant alleles and maps to 61 oligo probes.

Gene

This transcript is a product of gene ENSG00000167994.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394836.2	RAB3IL1-001	2284	382aa	ENSP00000378313.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8014	Q8TBN0	NM_013401.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000301773.5	RAB3IL1-002	2125	356aa	ENSP00000301773.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60809	Q8TBN0	NM_001271686.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531922.1	RAB3IL1-003	866	263aa	ENSP00000435444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK89	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526200.1	RAB3IL1-005	636	65aa	ENSP00000432745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YD19	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533136.1	RAB3IL1-006	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530888.1	RAB3IL1-004	189	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 189 bps,

Version

ENST00000530888.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394921 (version 1)

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Transcript: ENST00000530888.1 RAB3IL1-004

Summary