Transcript: ENST00000477555.1 PRDX2-003

Description

peroxiredoxin 2 [Source:HGNC Symbol;Acc:9353]

Gene Synonyms

HEL-S-2a, MGC4104, NKEF-B, NKEFB, PRP, PRX2, PRXII, PTX1, TDPX1, TPX1, TSA

Location

Chromosome 19: 12,910,730-12,912,602 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1015 variant alleles and maps to 277 oligo probes.

Gene

This transcript is a product of gene ENSG00000167815.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301522.2	PRDX2-001	987	198aa	ENSP00000301522.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12281	P32119	NM_005809.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334482.5	PRDX2-002	784	136aa	ENSP00000334063.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NIW5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435703.1	PRDX2-201	710	142aa	ENSP00000408905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P32119	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466174.1	PRDX2-006	1717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477555.1	PRDX2-003	699	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498785.1	PRDX2-005	505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478908.1	PRDX2-004	413	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 699 bps,

Version

ENST00000477555.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000258954 (version 1)

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Transcript: ENST00000477555.1 PRDX2-003

Summary