Transcript: ENST00000309311.6 EEF2-001

Description

eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:3214]

Gene Synonyms

EEF-2, EF-2, EF2, SCA26

Location

Chromosome 19: 3,976,054-3,985,467 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 29 domains and features, is associated with 7695 variant alleles and maps to 794 oligo probes.

Gene

This transcript is a product of gene ENSG00000167658.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309311.6	EEF2-001	3164	858aa	ENSP00000307940.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12117	B4DMC6 P13639 Q8TA90	NM_001961.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600794.1	EEF2-011	352	85aa	ENSP00000471265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000600720.1	EEF2-010	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000598182.1	EEF2-009	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594885.1	EEF2-006	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598436.1	EEF2-007	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596417.1	EEF2-008	218	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,164 bps, Translation length: 858 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P13639

CCDS

This transcript is a member of the Human CCDS set: CCDS12117

Version

ENST00000309311.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457615 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000309311.6 EEF2-001

Summary