Transcript: ENST00000593545.1 CYP2S1-002

Description

cytochrome P450, family 2, subfamily S, polypeptide 1 [Source:HGNC Symbol;Acc:15654]

Location

Chromosome 19: 41,699,144-41,712,822 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 6914 variant alleles and maps to 370 oligo probes.

Gene

This transcript is a product of gene ENSG00000167600.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310054.4	CYP2S1-001	2782	504aa	ENSP00000308032.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12573	Q96SQ9	NM_030622.6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542619.1	CYP2S1-201	1479	229aa	ENSP00000445299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJI0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597754.1	CYP2S1-004	580	175aa	ENSP00000471637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R152	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000600561.1	CYP2S1-006	580	187aa	ENSP00000471016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R057	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593890.1	CYP2S1-005	510	73aa	ENSP00000469850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYI2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593545.1	CYP2S1-002	1479	165aa	ENSP00000472555.1	Nonsense mediated decay		M0QY51 M0R2G8	-	-
ENST00000595590.1	CYP2S1-007	759	60aa	ENSP00000469593.1	Nonsense mediated decay		M0QY51	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,479 bps, Translation length: 165 residues

Version

ENST00000593545.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000463290 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000593545.1 CYP2S1-002

Summary