Transcript: ENST00000310054.4 CYP2S1-001

Description

cytochrome P450, family 2, subfamily S, polypeptide 1 [Source:HGNC Symbol;Acc:15654]

Location

Chromosome 19: 41,698,954-41,713,444 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 26 domains and features, is associated with 7300 variant alleles and maps to 465 oligo probes.

Gene

This transcript is a product of gene ENSG00000167600.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310054.4	CYP2S1-001	2782	504aa	ENSP00000308032.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12573	Q96SQ9	NM_030622.6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542619.1	CYP2S1-201	1479	229aa	ENSP00000445299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DJI0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597754.1	CYP2S1-004	580	175aa	ENSP00000471637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R152	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000600561.1	CYP2S1-006	580	187aa	ENSP00000471016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R057	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593890.1	CYP2S1-005	510	73aa	ENSP00000469850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYI2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000593545.1	CYP2S1-002	1479	165aa	ENSP00000472555.1	Nonsense mediated decay		M0QY51 M0R2G8	-	-
ENST00000595590.1	CYP2S1-007	759	60aa	ENSP00000469593.1	Nonsense mediated decay		M0QY51	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,782 bps, Translation length: 504 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96SQ9

CCDS

This transcript is a member of the Human CCDS set: CCDS12573

Version

ENST00000310054.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000463287 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310054.4 CYP2S1-001

Summary