Transcript: ENST00000589697.1 RAB8A-003

Description

RAB8A, member RAS oncogene family [Source:HGNC Symbol;Acc:7007]

Gene Synonyms

MEL, RAB8

Location

Chromosome 19: 16,222,725-16,237,800 forward strand.

About this transcript

This transcript has 4 exons, is associated with 6677 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000167461.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300935.3	RAB8A-001	2827	207aa	ENSP00000300935.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12339	P61006	NM_005370.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586682.1	RAB8A-002	1315	207aa	ENSP00000467501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEK7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588105.1	RAB8A-006	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589697.1	RAB8A-003	1754	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590899.1	RAB8A-005	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587156.1	RAB8A-007	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592971.1	RAB8A-004	300	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,754 bps,

Version

ENST00000589697.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000460191 (version 1)

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Transcript: ENST00000589697.1 RAB8A-003

Summary