Transcript: ENST00000585705.1 CA4-004

Description

carbonic anhydrase IV [Source:HGNC Symbol;Acc:1375]

Gene Synonyms

CAIV, Car4, RP17

Location

Chromosome 17: 58,227,303-58,234,313 forward strand.

About this transcript

This transcript has 3 exons, is associated with 3579 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSG00000167434.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300900.4	CA4-001	1154	312aa	ENSP00000300900.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11624	K7ENI8 P22748 Q6FHI7	NM_000717.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587265.1	CA4-006	702	99aa	ENSP00000464757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590203.1	CA4-005	677	184aa	ENSP00000465837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKY5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591725.1	CA4-003	565	38aa	ENSP00000466964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586876.1	CA4-002	941	106aa	ENSP00000467465.1	Nonsense mediated decay		B4DQA4	-	-
ENST00000585705.1	CA4-004	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 598 bps,

Version

ENST00000585705.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000449190 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000585705.1 CA4-004

Summary