Transcript: ENST00000300900.4 CA4-001

Description

carbonic anhydrase IV [Source:HGNC Symbol;Acc:1375]

Gene Synonyms

CAIV, Car4, RP17

Location

Chromosome 17: 58,227,297-58,236,901 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 5196 variant alleles and maps to 464 oligo probes.

Gene

This transcript is a product of gene ENSG00000167434.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300900.4	CA4-001	1154	312aa	ENSP00000300900.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11624	K7ENI8 P22748 Q6FHI7	NM_000717.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587265.1	CA4-006	702	99aa	ENSP00000464757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590203.1	CA4-005	677	184aa	ENSP00000465837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKY5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591725.1	CA4-003	565	38aa	ENSP00000466964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENI8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586876.1	CA4-002	941	106aa	ENSP00000467465.1	Nonsense mediated decay		B4DQA4	-	-
ENST00000585705.1	CA4-004	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,154 bps, Translation length: 312 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P22748

CCDS

This transcript is a member of the Human CCDS set: CCDS11624

Version

ENST00000300900.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000449189 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000300900.4 CA4-001

Summary