Transcript: ENST00000421678.2 LPO-201

Description

lactoperoxidase [Source:HGNC Symbol;Acc:6678]

Gene Synonyms

SAPX, SPO

Location

Chromosome 17: 56,315,787-56,345,878 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features, is associated with 13259 variant alleles and maps to 563 oligo probes.

Gene

This transcript is a product of gene ENSG00000167419.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262290.4	LPO-001	2979	712aa	ENSP00000262290.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32689	F5H386 J3QSD8 P22079	NM_006151.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421678.2	LPO-201	2729	629aa	ENSP00000400245.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54149	P22079	NM_001160102.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582328.1	LPO-006	2680	629aa	ENSP00000464636.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54149	P22079	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543544.1	LPO-002	2350	653aa	ENSP00000445344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H386 J3QSD8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581008.1	LPO-010	585	123aa	ENSP00000464643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSD8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000580890.1	LPO-007	1970	95aa	ENSP00000462752.1	Nonsense mediated decay		J3KT11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000389576.4	LPO-008	1942	117aa	ENSP00000374227.4	Nonsense mediated decay		H0Y3I2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578643.1	LPO-003	3371	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578403.1	LPO-004	1483	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580346.1	LPO-005	1243	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000582684.1	LPO-011	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,729 bps, Translation length: 629 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P22079

CCDS

This transcript is a member of the Human CCDS set: CCDS54149

Version

ENST00000421678.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000421678.2 LPO-201

Summary