Transcript: ENST00000390665.3 PPP2R3B-001

Description

protein phosphatase 2, regulatory subunit B'', beta [Source:HGNC Symbol;Acc:13417]

Gene Synonyms

NYREN8, PPP2R3L, PPP2R3LY, PR48

Location

Chromosome X: 294,698-347,445 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 35650 variant alleles and maps to 852 oligo probes.

Gene

This transcript is a product of gene ENSG00000167393.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000390665.3	PPP2R3B-001	2151	575aa	ENSP00000375080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14104	Q96FD8 Q9Y5P8	NM_013239.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381625.4	PPP2R3B-002	782	169aa	ENSP00000371038.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMU6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477110.1	PPP2R3B-003	5802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000445792.2	PPP2R3B-007	1998	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479438.1	PPP2R3B-008	1090	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484364.1	PPP2R3B-004	732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468169.1	PPP2R3B-006	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477636.1	PPP2R3B-005	519	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496630.1	PPP2R3B-010	458	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475859.1	PPP2R3B-009	408	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,151 bps, Translation length: 575 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y5P8

CCDS

This transcript is a member of the Human CCDS set: CCDS14104

Version

ENST00000390665.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055577 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000390665.3 PPP2R3B-001

Summary