Transcript: ENST00000300682.10 ENGASE-003

Description

endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:24622]

Gene Synonyms

FLJ21865

Location

Chromosome 17: 77,076,394-77,084,681 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features, is associated with 4815 variant alleles and maps to 590 oligo probes.

Gene

This transcript is a product of gene ENSG00000167280.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000579016.1	ENGASE-001	2579	743aa	ENSP00000462333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42394	Q8NFI3	NM_001042573.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000311595.9	ENGASE-011	1381	365aa	ENSP00000308158.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539857.2	ENGASE-201	1381	220aa	ENSP00000460579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3M8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000300682.10	ENGASE-003	4626	183aa	ENSP00000300682.10	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578419.1	ENGASE-002	1381	146aa	ENSP00000463537.1	Nonsense mediated decay		J3QLG5	-	-
ENST00000584568.1	ENGASE-012	448	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585160.1	ENGASE-010	284	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000579809.1	ENGASE-009	1428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000577783.2	ENGASE-013	621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583041.2	ENGASE-007	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583646.1	ENGASE-005	471	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 3, Transcript length: 4,626 bps, Translation length: 183 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000300682.10

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395808 (version 1)

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Transcript: ENST00000300682.10 ENGASE-003

Summary