Transcript: ENST00000373424.1 UGT1A6-003

Description

UDP glucuronosyltransferase 1 family, polypeptide A6 [Source:HGNC Symbol;Acc:12538]

Gene Synonyms

GNT1, HLUGP, HLUGP1, UDPGT, UDPGT 1-6, UGT1, UGT1A6S, UGT1F

Location

Chromosome 2: 234,600,253-234,681,314 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 38253 variant alleles and maps to 354 oligo probes.

Gene

This transcript is a product of gene ENSG00000167165.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000305139.6	UGT1A6-001	2479	532aa	ENSP00000303174.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2507	C9JMY5 H7C5F8 P19224 Q5DSZ8	NM_001072.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373424.1	UGT1A6-003	1128	265aa	ENSP00000362523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2508	P19224	NM_205862.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406651.1	UGT1A6-005	785	176aa	ENSP00000386107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCT4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441351.1	UGT1A6-007	745	189aa	ENSP00000389637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMY5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446481.2	UGT1A6-004	832	176aa	ENSP00000401541.1	Nonsense mediated decay		B5MCT4	-	-
ENST00000484784.2	UGT1A6-008	567	67aa	ENSP00000419780.2	Nonsense mediated decay		H7C5F8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480628.1	UGT1A6-002	1848	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478062.2	UGT1A6-006	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,128 bps, Translation length: 265 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P19224

CCDS

This transcript is a member of the Human CCDS set: CCDS2508

Version

ENST00000373424.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000130990 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000373424.1 UGT1A6-003

Summary