Transcript: ENST00000300404.2 B4GALNT2-001

Description

beta-1,4-N-acetyl-galactosaminyl transferase 2 [Source:HGNC Symbol;Acc:24136]

Gene Synonyms

B4GALT, Cad, GALGT2, Sda

Location

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 16837 variant alleles and maps to 352 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300404.2	B4GALNT2-001	1906	566aa	ENSP00000300404.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11544	Q8IVI2 Q8NHY0	NM_153446.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504681.1	B4GALNT2-003	1819	480aa	ENSP00000425510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54140	Q8IVI2 Q8NHY0	NM_001159388.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393354.2	B4GALNT2-002	1691	506aa	ENSP00000377022.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54139	Q8IVI2 Q8NHY0	NM_001159387.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,906 bps, Translation length: 566 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NHY0

CCDS

This transcript is a member of the Human CCDS set: CCDS11544

Version

ENST00000300404.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000364477 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.