Transcript: ENST00000566340.1 NUDT21-003

Description

nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Source:HGNC Symbol;Acc:13870]

Gene Synonyms

CFIM25, CPSF25, CPSF5

Location

Chromosome 16: 56,468,258-56,486,111 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 7877 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSG00000167005.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300291.5	NUDT21-001	4436	227aa	ENSP00000300291.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10760	H3BND3 H3BV41 O43809	NM_007006.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566340.1	NUDT21-003	581	149aa	ENSP00000454790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BND3 H3BV41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568822.1	NUDT21-005	385	71aa	ENSP00000457942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BV41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567110.1	NUDT21-004	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563860.1	NUDT21-007	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563362.1	NUDT21-006	449	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 581 bps, Translation length: 149 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000566340.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000434707 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000566340.1 NUDT21-003

Summary