Transcript: ENST00000554234.1 MYO1A-009

Description

myosin IA [Source:HGNC Symbol;Acc:7595]

Gene Synonyms

BBMI, DFNA48, MIHC, MYHL

Location

Chromosome 12: 57,422,402-57,441,614 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 16 domains and features, is associated with 8558 variant alleles and maps to 635 oligo probes.

Gene

This transcript is a product of gene ENSG00000166866.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000442789.2	MYO1A-004	3658	1043aa	ENSP00000393392.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8929	C9JU63 F5GWY8 G3V587 Q13871 Q9UBC5	NM_001256041.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000300119.3	MYO1A-001	3621	1043aa	ENSP00000300119.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8929	C9JU63 F5GWY8 G3V587 Q13871 Q9UBC5	NM_005379.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544473.1	MYO1A-201	3101	881aa	ENSP00000440514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWY8 G3V587	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492945.1	MYO1A-003	566	73aa	ENSP00000452229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V587	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433964.1	MYO1A-002	560	96aa	ENSP00000400991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JU63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554234.1	MYO1A-009	3099	688aa	ENSP00000451033.1	Nonsense mediated decay		G3V342 G3V587	-	-
ENST00000476795.1	MYO1A-006	631	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471791.1	MYO1A-005	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477864.1	MYO1A-008	509	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487083.1	MYO1A-007	402	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 18, Transcript length: 3,099 bps, Translation length: 688 residues

Version

ENST00000554234.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411215 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

Favourite species

All species

Recent locations

Transcript: ENST00000554234.1 MYO1A-009

Summary