Transcript: ENST00000300056.3 PEX11A-001

Description

peroxisomal biogenesis factor 11 alpha [Source:HGNC Symbol;Acc:8852]

Gene Synonyms

MGC119947, MGC138534, PEX11, PEX11-ALPHA, PMP28, hsPEX11p

Location

Chromosome 15: 90,224,762-90,234,013 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 4269 variant alleles and maps to 423 oligo probes.

Gene

This transcript is a product of gene ENSG00000166821.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300056.3	PEX11A-001	2740	247aa	ENSP00000300056.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10354	B2R8C6 B4DMF6 O75192	NM_003847.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561257.1	PEX11A-004	978	216aa	ENSP00000453492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61751	B4DMF6 B4DV88	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559170.1	PEX11A-005	905	32aa	ENSP00000453878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YN61	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561224.1	PEX11A-002	529	64aa	ENSP00000453552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMC7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557982.1	PEX11A-003	646	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,740 bps, Translation length: 247 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75192

CCDS

This transcript is a member of the Human CCDS set: CCDS10354

Version

ENST00000300056.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000313420 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000300056.3 PEX11A-001

Summary