Transcript: ENST00000396215.3 LDHC-005

Description

lactate dehydrogenase C [Source:HGNC Symbol;Acc:6544]

Gene Synonyms

CT32, LDH3, LDHX

Location

Chromosome 11: 18,433,870-18,472,790 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 16299 variant alleles and maps to 363 oligo probes.

Gene

This transcript is a product of gene ENSG00000166796.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541669.1	LDHC-001	2041	332aa	ENSP00000437783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7840	G9BCZ1 P07864	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000280704.4	LDHC-002	1256	332aa	ENSP00000280704.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7840	G9BCZ1 P07864	NM_017448.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536880.1	LDHC-006	957	318aa	ENSP00000439555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H245 G9BCZ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544105.1	LDHC-009	875	241aa	ENSP00000439060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAP5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535809.1	LDHC-010	757	225aa	ENSP00000443997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H155	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546146.1	LDHC-008	701	183aa	ENSP00000443414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5G7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537486.1	LDHC-007	583	167aa	ENSP00000441478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ11	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396215.3	LDHC-005	1092	51aa	ENSP00000379518.3	Nonsense mediated decay		F5H326	-	-
ENST00000539369.1	LDHC-004	881	45aa	ENSP00000441991.1	Nonsense mediated decay		F5GWS6	-	-
ENST00000545848.1	LDHC-003	813	51aa	ENSP00000438196.1	Nonsense mediated decay		F5H326	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 1,092 bps, Translation length: 51 residues

Version

ENST00000396215.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395893 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000396215.3 LDHC-005

Summary