Transcript: ENST00000280704.4 LDHC-002

Description

lactate dehydrogenase C [Source:HGNC Symbol;Acc:6544]

Gene Synonyms

CT32, LDH3, LDHX

Location

Chromosome 11: 18,433,878-18,472,790 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 16295 variant alleles and maps to 373 oligo probes.

Gene

This transcript is a product of gene ENSG00000166796.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541669.1	LDHC-001	2041	332aa	ENSP00000437783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7840	G9BCZ1 P07864	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000280704.4	LDHC-002	1256	332aa	ENSP00000280704.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7840	G9BCZ1 P07864	NM_017448.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536880.1	LDHC-006	957	318aa	ENSP00000439555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H245 G9BCZ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544105.1	LDHC-009	875	241aa	ENSP00000439060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3XAP5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535809.1	LDHC-010	757	225aa	ENSP00000443997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H155	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546146.1	LDHC-008	701	183aa	ENSP00000443414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5G7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537486.1	LDHC-007	583	167aa	ENSP00000441478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ11	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396215.3	LDHC-005	1092	51aa	ENSP00000379518.3	Nonsense mediated decay		F5H326	-	-
ENST00000539369.1	LDHC-004	881	45aa	ENSP00000441991.1	Nonsense mediated decay		F5GWS6	-	-
ENST00000545848.1	LDHC-003	813	51aa	ENSP00000438196.1	Nonsense mediated decay		F5H326	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,256 bps, Translation length: 332 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P07864

CCDS

This transcript is a member of the Human CCDS set: CCDS7840

Version

ENST00000280704.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000395894 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000280704.4 LDHC-002

Summary