Transcript: ENST00000539681.1 MMP10-002

Description

matrix metallopeptidase 10 (stromelysin 2) [Source:HGNC Symbol;Acc:7156]

Gene Synonyms

SL-2, STMY2

Location

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 1054 variant alleles and maps to 114 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000279441.4	MMP10-001	1758	476aa	ENSP00000279441.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8321	P09238	NM_002425.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539681.1	MMP10-002	581	181aa	ENSP00000441485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 581 bps, Translation length: 181 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000539681.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398015 (version 1)