Transcript: ENST00000299736.4 CENPV-001

Description

centromere protein V [Source:HGNC Symbol;Acc:29920]

Gene Synonyms

3110013H01Rik, CENP-V, PRR6, p30

Location

Chromosome 17: 16,245,848-16,256,813 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 4942 variant alleles and maps to 324 oligo probes.

Gene

This transcript is a product of gene ENSG00000166582.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299736.4	CENPV-001	1165	272aa	ENSP00000299736.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32575	Q7Z7K6	NM_181716.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476243.1	CENPV-002	1770	118aa	ENSP00000462377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z7K6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482983.1	CENPV-003	473	14aa	ENSP00000468338.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000584214.1	CENPV-006	735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000582062.1	CENPV-005	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472570.1	CENPV-004	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,165 bps, Translation length: 272 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z7K6

CCDS

This transcript is a member of the Human CCDS set: CCDS32575

Version

ENST00000299736.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000131877 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000299736.4 CENPV-001

Summary