Transcript: ENST00000321728.7 PRKCB-001

Description

protein kinase C, beta [Source:HGNC Symbol;Acc:9395]

Gene Synonyms

PKC-beta, PKCB, PRKCB1, PRKCB2

Location

Chromosome 16: 23,847,322-24,231,932 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 39 domains and features, is associated with 171429 variant alleles and maps to 644 oligo probes.

Gene

This transcript is a product of gene ENSG00000166501.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303531.7	PRKCB-002	7969	673aa	ENSP00000305355.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10619	I3L1Z0 P05771	NM_002738.6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000321728.7	PRKCB-001	2689	671aa	ENSP00000318315.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10618	I3L1Z0 P05771	NM_212535.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498739.1	PRKCB-004	569	119aa	ENSP00000459227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1Z0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472066.1	PRKCB-007	556	130aa	ENSP00000457980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BV73	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000466124.1	PRKCB-010	536	122aa	ENSP00000458564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498058.1	PRKCB-003	480	57aa	ENSP00000454428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P05771	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000482000.1	PRKCB-006	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487674.1	PRKCB-009	693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463752.1	PRKCB-008	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486868.1	PRKCB-005	467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,689 bps, Translation length: 671 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05771

CCDS

This transcript is a member of the Human CCDS set: CCDS10618

Version

ENST00000321728.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254504 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000321728.7 PRKCB-001

Summary