Transcript: ENST00000299424.4 TAF10-001

Description

TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa [Source:HGNC Symbol;Acc:11543]

Gene Synonyms

TAF2A, TAF2H, TAFII30

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 1276 variant alleles and maps to 519 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299424.4	TAF10-001	1215	218aa	ENSP00000299424.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7769	Q12962	NM_006284.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531760.1	TAF10-005	502	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527248.1	TAF10-004	425	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526743.1	TAF10-002	5393	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000532344.1	TAF10-003	638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,215 bps, Translation length: 218 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12962

CCDS

This transcript is a member of the Human CCDS set: CCDS7769

Version

ENST00000299424.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257259 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.