Transcript: ENST00000531843.1 CUL5-005

Description

cullin 5 [Source:HGNC Symbol;Acc:2556]

Gene Synonyms

VACM-1, VACM1

Location

About this transcript

This transcript has 2 exons, is associated with 321 variant alleles and maps to 41 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393094.2	CUL5-001	6351	780aa	ENSP00000376808.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31668	L0L6C1 L0L6D8 Q93034	NM_003478.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532782.1	CUL5-006	388	130aa	ENSP00000431221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000531427.1	CUL5-003	3596	780aa	ENSP00000435376.1	Nonsense mediated decay	CCDS31668	L0L6C1 L0L6D8 Q93034	-	-
ENST00000532064.1	CUL5-002	1109	47aa	ENSP00000436494.1	Nonsense mediated decay		E9PP19	-	-
ENST00000531843.1	CUL5-005	375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526303.1	CUL5-004	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 375 bps,

Version

ENST00000531843.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389434 (version 1)