Transcript: ENST00000430419.1 OPN1MW2-002

Description

opsin 1 (cone pigments), medium-wave-sensitive 2 [Source:HGNC Symbol;Acc:26952]

Gene Synonyms

CBBM, CBD, COD5, GCP, GOP, OPN1MW1

Location

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 271 variant alleles and maps to 404 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369929.4	OPN1MW2-001	1261	364aa	ENSP00000358945.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35447	P04001	NM_001048181.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430419.1	OPN1MW2-002	590	164aa	ENSP00000403023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488220.1	OPN1MW2-003	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 590 bps, Translation length: 164 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000430419.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000280571 (version 1)