Transcript: ENST00000558119.1 RAB8B-004

Description

RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:30273]

Location

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 30579 variant alleles and maps to 307 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000321437.4	RAB8B-001	4943	207aa	ENSP00000312734.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10183	Q92930	NM_016530.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448330.2	RAB8B-201	1361	190aa	ENSP00000405463.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GY21	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559006.1	RAB8B-005	584	188aa	ENSP00000453982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNE9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558119.1	RAB8B-004	774	92aa	ENSP00000453679.1	Nonsense mediated decay		H0YMN7	-	-
ENST00000559927.1	RAB8B-003	755	48aa	ENSP00000453111.1	Nonsense mediated decay		H0YL94	-	-
ENST00000558990.1	RAB8B-002	643	47aa	ENSP00000453236.1	Nonsense mediated decay		H0YLJ8	-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 774 bps, Translation length: 92 residues

Version

ENST00000558119.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417742 (version 1)