Transcript: ENST00000299022.5 LIPC-001

Description

lipase, hepatic [Source:HGNC Symbol;Acc:6619]

Gene Synonyms

HDLCQ12, HL, HTGL, LIPH

Location

Chromosome 15: 58,723,997-58,861,073 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 67691 variant alleles and maps to 355 oligo probes.

Gene

This transcript is a product of gene ENSG00000166035.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356113.6	LIPC-002	2161	499aa	ENSP00000348425.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10166	P11150	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414170.3	LIPC-003	2968	499aa	ENSP00000395569.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUJ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000299022.5	LIPC-001	1782	499aa	ENSP00000299022.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10166	P11150	NM_000236.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433326.2	LIPC-005	1484	438aa	ENSP00000395002.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUK6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559845.1	LIPC-004	1530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560257.1	LIPC-006	934	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560664.1	LIPC-007	815	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,782 bps, Translation length: 499 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11150

CCDS

This transcript is a member of the Human CCDS set: CCDS10166

Version

ENST00000299022.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255879 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000299022.5 LIPC-001

Summary