Transcript: ENST00000493113.1 ALDH1A1-003

Description

aldehyde dehydrogenase 1 family, member A1 [Source:HGNC Symbol;Acc:402]

Gene Synonyms

ALDC, ALDH-E1, ALDH1, ALDH11, HEL-S-53e, HEL12, PUMB1, RALDH1

Location

Chromosome 9: 75,541,899-75,567,883 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 10776 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSG00000165092.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297785.3	ALDH1A1-001	2107	501aa	ENSP00000297785.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6644	B4DDF8 P00352 Q5SYQ7 Q5SYQ8	NM_000689.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376939.1	ALDH1A1-005	822	230aa	ENSP00000366138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SYQ7 Q5SYQ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419959.1	ALDH1A1-006	806	238aa	ENSP00000388026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SYQ7 Q5SYQ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446946.1	ALDH1A1-002	805	203aa	ENSP00000401361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SYQ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482210.1	ALDH1A1-004	879	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493113.1	ALDH1A1-003	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493311.1	ALDH1A1-007	209	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 604 bps,

Version

ENST00000493113.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000052681 (version 1)

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Transcript: ENST00000493113.1 ALDH1A1-003

Summary