Transcript: ENST00000297770.4 CPA6-001

Description

carboxypeptidase A6 [Source:HGNC Symbol;Acc:17245]

Gene Synonyms

CPAH, ETL5, FEB11

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 138720 variant alleles and maps to 357 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297770.4	CPA6-001	1861	437aa	ENSP00000297770.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6200	Q8N4T0	NM_020361.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297769.4	CPA6-201	1616	193aa	ENSP00000297769.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4T0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518549.1	CPA6-003	1538	315aa	ENSP00000431112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4T0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479862.2	CPA6-002	1494	92aa	ENSP00000419016.2	Nonsense mediated decay		F8WAH2	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,861 bps, Translation length: 437 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N4T0

CCDS

This transcript is a member of the Human CCDS set: CCDS6200

Version

ENST00000297770.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000379296 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.