Transcript: ENST00000522934.1 COX6C-010

Description

cytochrome c oxidase subunit VIc [Source:HGNC Symbol;Acc:2285]

Location

Chromosome 8: 100,885,428-100,905,934 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 9637 variant alleles and maps to 294 oligo probes.

Gene

This transcript is a product of gene ENSG00000164919.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000520468.2	COX6C-001	1098	75aa	ENSP00000428895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6284	P09669	NM_004374.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523016.1	COX6C-004	745	75aa	ENSP00000429707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6284	P09669	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518171.1	COX6C-002	724	75aa	ENSP00000429755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6284	P09669	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522940.1	COX6C-006	694	75aa	ENSP00000428965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6284	P09669	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520271.1	COX6C-007	571	75aa	ENSP00000428150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6284	P09669	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524245.1	COX6C-008	513	75aa	ENSP00000429410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6284	P09669	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297564.2	COX6C-003	433	75aa	ENSP00000297564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6284	P09669	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517682.2	COX6C-005	429	75aa	ENSP00000429714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6284	P09669	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520517.1	COX6C-009	566	75aa	ENSP00000429991.1	Nonsense mediated decay	CCDS6284	P09669	-	-
ENST00000522934.1	COX6C-010	562	75aa	ENSP00000428702.1	Nonsense mediated decay	CCDS6284	P09669	-	-
ENST00000606245.1	COX6C-011	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 562 bps, Translation length: 75 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09669

CCDS

This transcript is a member of the Human CCDS set: CCDS6284

Version

ENST00000522934.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379832 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000522934.1 COX6C-010

Summary