Transcript: ENST00000328914.4 FOXK1-001

Description

forkhead box K1 [Source:HGNC Symbol;Acc:23480]

Gene Synonyms

FOXK1L, IMAGE:5164497, MNF

Location

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 49443 variant alleles and maps to 670 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328914.4	FOXK1-001	11181	733aa	ENSP00000328720.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34591	B3KV39 P85037	NM_001037165.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446823.1	FOXK1-201	2032	570aa	ENSP00000394442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KV39 P85037	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460979.2	FOXK1-002	758	109aa	ENSP00000475486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000496023.1	FOXK1-003	1928	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 11,181 bps, Translation length: 733 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P85037

CCDS

This transcript is a member of the Human CCDS set: CCDS34591

Version

ENST00000328914.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000323729 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.