Transcript: ENST00000485972.1 CDK5-001

Description

cyclin-dependent kinase 5 [Source:HGNC Symbol;Acc:1774]

Gene Synonyms

CDKN5, PSSALRE

Location

Chromosome 7: 150,750,899-150,755,617 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 2376 variant alleles and maps to 549 oligo probes.

Gene

This transcript is a product of gene ENSG00000164885.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000485972.1	CDK5-001	1758	292aa	ENSP00000419782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47748	Q00535	NM_004935.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297518.4	CDK5-003	783	260aa	ENSP00000297518.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55184	Q00535	NM_001164410.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487703.1	CDK5-004	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476691.1	CDK5-006	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469108.1	CDK5-005	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,758 bps, Translation length: 292 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q00535

CCDS

This transcript is a member of the Human CCDS set: CCDS47748

Version

ENST00000485972.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000350965 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000485972.1 CDK5-001

Summary