Transcript: ENST00000413368.1 GPER1-033

Description

G protein-coupled estrogen receptor 1 [Source:HGNC Symbol;Acc:4485]

Gene Synonyms

CEPR, CMKRL2, DRY12, FEG-1, GPCR-Br, GPER, GPR30, LERGU, LERGU2, LyGPR

Location

Chromosome 7: 1,126,443-1,131,585 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 2659 variant alleles and maps to 261 oligo probes.

Gene

This transcript is a product of gene ENSG00000164850.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397092.1	GPER1-201	2971	375aa	ENSP00000380281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5322	C9J3W2 Q99527	NM_001039966.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297469.3	GPER1-030	2778	375aa	ENSP00000297469.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5322	C9J3W2 Q99527	NM_001505.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397088.3	GPER1-031	2639	375aa	ENSP00000380277.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5322	C9J3W2 Q99527	NM_001098201.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401670.1	GPER1-032	1542	375aa	ENSP00000385151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5322	C9J3W2 Q99527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413368.1	GPER1-033	1105	73aa	ENSP00000410487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3W2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,105 bps, Translation length: 73 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000413368.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322810 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000413368.1 GPER1-033

Summary