Transcript: ENST00000297469.3 GPER1-030

Description

G protein-coupled estrogen receptor 1 [Source:HGNC Symbol;Acc:4485]

Gene Synonyms

CEPR, CMKRL2, DRY12, FEG-1, GPCR-Br, GPER, GPR30, LERGU, LERGU2, LyGPR

Location

Chromosome 7: 1,126,512-1,133,451 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 22 domains and features, is associated with 3955 variant alleles and maps to 566 oligo probes.

Gene

This transcript is a product of gene ENSG00000164850.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397092.1	GPER1-201	2971	375aa	ENSP00000380281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5322	C9J3W2 Q99527	NM_001039966.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297469.3	GPER1-030	2778	375aa	ENSP00000297469.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5322	C9J3W2 Q99527	NM_001505.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397088.3	GPER1-031	2639	375aa	ENSP00000380277.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5322	C9J3W2 Q99527	NM_001098201.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401670.1	GPER1-032	1542	375aa	ENSP00000385151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5322	C9J3W2 Q99527	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413368.1	GPER1-033	1105	73aa	ENSP00000410487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3W2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,778 bps, Translation length: 375 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99527

CCDS

This transcript is a member of the Human CCDS set: CCDS5322

Version

ENST00000297469.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000060001 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000297469.3 GPER1-030

Summary