Transcript: ENST00000297347.3 MED30-001

Description

mediator complex subunit 30 [Source:HGNC Symbol;Acc:23032]

Gene Synonyms

MED30S, THRAP6, TRAP25

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 7779 variant alleles and maps to 333 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297347.3	MED30-001	985	178aa	ENSP00000297347.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6323	Q96HR3	NM_080651.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522839.1	MED30-002	476	143aa	ENSP00000431051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64959	C6GKU9	NM_001282986.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519391.1	MED30-004	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519879.1	MED30-003	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 985 bps, Translation length: 178 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96HR3

CCDS

This transcript is a member of the Human CCDS set: CCDS6323

Version

ENST00000297347.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000380923 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.