Transcript: ENST00000519688.1 SLC30A8-001

Description

solute carrier family 30 (zinc transporter), member 8 [Source:HGNC Symbol;Acc:20303]

Gene Synonyms

ZNT8, ZnT-8

Location

Chromosome 8: 118,147,498-118,184,974 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 14 domains and features, is associated with 15598 variant alleles and maps to 330 oligo probes.

Gene

This transcript is a product of gene ENSG00000164756.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000456015.2	SLC30A8-002	2520	369aa	ENSP00000415011.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6322	E5RG87 Q8IWU4	NM_173851.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427715.2	SLC30A8-201	5430	320aa	ENSP00000407505.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55272	E5RG87 Q8IWU4	NM_001172815.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521243.1	SLC30A8-003	1393	320aa	ENSP00000428545.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55272	E5RG87 Q8IWU4	NM_001172811.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519688.1	SLC30A8-001	1263	320aa	ENSP00000431069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55272	E5RG87 Q8IWU4	NM_001172814.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524274.1	SLC30A8-005	549	87aa	ENSP00000427760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521035.1	SLC30A8-009	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518521.1	SLC30A8-006	823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518396.1	SLC30A8-007	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520469.1	SLC30A8-008	585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,263 bps, Translation length: 320 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IWU4

CCDS

This transcript is a member of the Human CCDS set: CCDS55272

Version

ENST00000519688.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381204 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000519688.1 SLC30A8-001

Summary