Transcript: ENST00000297258.6 FABP5-001

Description

fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560]

Gene Synonyms

E-FABP, EFABP, KFABP, PA-FABP, PAFABP

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 2099 variant alleles and maps to 558 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297258.6	FABP5-001	851	135aa	ENSP00000297258.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6228	E7DVW5 I6L8B7 Q01469	NM_001444.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396359.1	FABP5-002	986	101aa	ENSP00000379647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I6L8B7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481695.1	FABP5-004	756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486269.1	FABP5-003	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 851 bps, Translation length: 135 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01469

CCDS

This transcript is a member of the Human CCDS set: CCDS6228

Version

ENST00000297258.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000259329 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.