Transcript: ENST00000396872.3 SLC29A4-001

Description

solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:HGNC Symbol;Acc:23097]

Gene Synonyms

ENT4, FLJ34923, PMAT

Location

Chromosome 7: 5,322,561-5,346,501 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 25 domains and features, is associated with 17979 variant alleles and maps to 666 oligo probes.

Gene

This transcript is a product of gene ENSG00000164638.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396872.3	SLC29A4-001	5685	530aa	ENSP00000380081.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5340	C9IYM7 Q7RTT9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297195.4	SLC29A4-002	2839	530aa	ENSP00000297195.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5340	C9IYM7 Q7RTT9	NM_153247.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406453.3	SLC29A4-003	2734	516aa	ENSP00000385845.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZA2 Q7RTT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434816.1	SLC29A4-004	623	163aa	ENSP00000406803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IYM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444741.1	SLC29A4-005	585	151aa	ENSP00000413271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZA2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000439491.2	SLC29A4-006	805	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 5,685 bps, Translation length: 530 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7RTT9

CCDS

This transcript is a member of the Human CCDS set: CCDS5340

Version

ENST00000396872.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000060118 (version 6)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000396872.3 SLC29A4-001

Summary