Transcript: ENST00000421175.1 ATRIP-007

Description

ATR interacting protein [Source:HGNC Symbol;Acc:33499]

Gene Synonyms

AGS1, FLJ12343, MGC20625, MGC21482, MGC26740

Location

Chromosome 3: 48,488,114-48,500,796 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 5395 variant alleles and maps to 204 oligo probes.

Gene

This transcript is a product of gene ENSG00000164053.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320211.3	ATRIP-001	2590	791aa	ENSP00000323099.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2768	C9IZM8 Q8WXE1	NM_130384.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000412052.1	ATRIP-005	2721	698aa	ENSP00000400930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59449	C9IZM8 Q8WXE1	NM_001271023.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346691.4	ATRIP-002	2509	764aa	ENSP00000302338.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2767	C9IZM8 Q8WXE1	NM_032166.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357105.6	ATRIP-201	2376	664aa	ENSP00000349620.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59450	Q8WXE1	NM_001271022.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421175.1	ATRIP-007	711	196aa	ENSP00000406664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZM8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424906.1	ATRIP-003	2376	46aa	ENSP00000401761.1	Nonsense mediated decay		F8WEI5	-	-
ENST00000454733.1	ATRIP-008	793	131aa	ENSP00000402340.1	Nonsense mediated decay		F8WE08	-	-
ENST00000491468.1	ATRIP-009	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 711 bps, Translation length: 196 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000421175.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344696 (version 1)

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Transcript: ENST00000421175.1 ATRIP-007

Summary