Transcript: ENST00000503230.1 SLC9B2-003

Description

solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 [Source:HGNC Symbol;Acc:25143]

Gene Synonyms

FLJ23984, NHA2, NHE10, NHEDC2

Location

Chromosome 4: 103,947,321-103,998,439 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 20484 variant alleles and maps to 415 oligo probes.

Gene

This transcript is a product of gene ENSG00000164038.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394785.3	SLC9B2-001	3126	537aa	ENSP00000378265.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3662	D6RGJ7 Q86UD5	NM_178833.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000362026.3	SLC9B2-002	2300	537aa	ENSP00000354574.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3662	D6RGJ7 Q86UD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339611.4	SLC9B2-201	2237	454aa	ENSP00000345241.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGJ7 Q86UD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503103.1	SLC9B2-004	1911	417aa	ENSP00000425385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z566 B7Z676	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503230.1	SLC9B2-003	1826	480aa	ENSP00000422477.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z566 E9PE63	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506288.1	SLC9B2-006	1115	354aa	ENSP00000421943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86UD5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503818.1	SLC9B2-007	648	143aa	ENSP00000426305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGJ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000508136.1	SLC9B2-012	578	112aa	ENSP00000423496.1	Nonsense mediated decay		D6R9P2	-	-
ENST00000505838.1	SLC9B2-008	824	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515424.1	SLC9B2-005	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510976.1	SLC9B2-013	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512806.1	SLC9B2-010	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,826 bps, Translation length: 480 residues

Version

ENST00000503230.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000363235 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000503230.1 SLC9B2-003

Summary